Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
SARC rs34342669 chr11:70273999 AT/A 9.12E-5 256 29.25 36.02 23.03 KM Plot
SARC rs34442406 chr17:45474832 GC/G 4.7E-5 256 19.83 34 32.3 KM Plot
SARC rs34552094 chr3:53074861 A/ATG 0 256 32.3 31.97 2.13 KM Plot
SARC rs34567904 chr7:134020285 C/G 2.46E-5 252 32.35 31.27 22.03 KM Plot
SARC rs34608007 chr4:7027881 CT/C 5.27E-5 250 16.17 30.32 32.4 KM Plot
SARC rs34644806 chr2:70232817 AG/A 4.35E-8 255 32.78 32.6 10.72 KM Plot
SARC rs34693190 chr3:38997222 T/A 9.89E-5 256 30.73 35.67 16.17 KM Plot
SARC rs34754279 chr3:53099554 C/T 0 256 31.57 31.97 2.13 KM Plot
SARC rs34815560 chr5:225328 A/AG 2.78E-5 248 33.9 28.23 8.7 KM Plot
SARC rs34872575 chr3:52986277 G/A 2.09E-14 254 30.85 35.37 1.17 KM Plot
SARC rs34937911 chr4:42110353 T/C 3.89E-5 254 33.83 31.1 14.33 KM Plot
SARC rs34943350 chr3:53012888 C/T 1.79E-14 256 30.85 35.37 1.17 KM Plot
SARC rs34959377 chr11:70280242 A/G 5.34E-5 249 30.85 36.27 20.87 KM Plot
SARC rs34974069 chr4:6965877 TA/T 7.7E-5 248 12.82 32.38 32.5 KM Plot
SARC rs34979715 chr3:53048960 G/A 1.81E-14 256 30.85 35.37 1.17 KM Plot